A guide to plant EV isolation and characterization

Author: admin    Published:2026-08-12 16:15:27   Views:

Introduction: Why is plant EV isolation more challenging than animal EV isolation?

Plant-derived extracellular vesicles (PDEVs) have attracted interest for potential use in cosmetics, aesthetic medicine ingredients, functional foods and drug delivery. Unlike animal cell-culture supernatants, plant tissues contain cell walls, polysaccharides, polyphenols, pigments and fibers. Inadequate pretreatment can cause membrane particles from broken cells and other impurities to co-enrich with vesicles. Isolation should therefore be designed around sample properties, target purity and downstream use rather than a fixed kit or single workflow.

A complete plant EV isolation and characterization workflow generally includes sample pretreatment, supernatant collection, isolation and purification, characterization, and quality control and delivery. Drawing on Lifeint’s reported experience of more than 20,000 EV-related projects and coverage of over 300 plant species, including more than 160 medicinal plants, this guide presents technical points, reference parameters and common pitfalls.

Step 1: Sample pretreatment and supernatant collection

Three common plant-vesicle sample sources are:

For dense tissues such as roots and stems, low-temperature grinding may increase extractable particles, but the resulting sample can also contain membrane particles from broken cells. The source recommends stating this limitation in study design and reporting, rather than equating nanovesicles obtained by different preparation routes.

The source describes enzymatic digestion or culture as ways to obtain an EV-containing supernatant for subsequent isolation.

The source notes that plant EV content is often lower than that of animal-derived samples and recommends sufficient supernatant volume (≥50 mL) to obtain enough particles for downstream characterization and omics after purification.

Step 2: Isolation and purification

This is a key step affecting EV purity, integrity and yield. Common methods are compared below for different sample volumes and purity requirements:

MethodPrincipleReference priceTurnaroundApplications
Ultracentrifugation (standard)Differential ultracentrifugation (UC)200 CNY/50 mL3 business daysConventional samples; classic workflow
Ultracentrifugation (sucrose cushion)Sucrose cushion to reduce protein impurities300 CNY/50 mL3 business daysSamples requiring improved purity
Ultracentrifugation (iodixanol gradient)OptiPrep density-gradient centrifugation500 CNY/50 mL3 business daysHigh-purity applications; ≥6 samples per batch
Polymer precipitation (PEG)PEG precipitation200 CNY/50 mL3 business daysFast and low cost
Ultrasound nanofiltration (EXODUS)Ultrasound nanofiltration chipCNY 600/500 μL5 business daysSmall, precious samples (≤1 mL)
Magnetic-bead capture (MSP membrane-sensing peptide)Membrane-sensing peptide-conjugated beads200 CNY/sample3 business daysRapid total EV enrichment (≤1.5 mL)
Large-volume isolation (EXO-DM)Multistage membrane filtration + tangential-flow concentration + size-exclusion purificationCNY 1,500/L10 business daysSamples ≥3 L; industrial-scale applications

Large-volume isolation (EXO-DM)

For industrial demand in areas such as cosmetic, aesthetic medicine and food ingredients, the source describes Lifeint’s EXO-DM large-volume isolation equipment using tangential-flow filtration (TFF) and size-exclusion chromatography (SEC), with the following process:

Supernatant pretreatment → porous-membrane coarse filtration → ceramic-membrane fine filtration → disc dual-phase sterile filtration → ultra-high-pressure tangential-flow concentration → low-pressure high-throughput size-exclusion chromatography → iodixanol-cushion ultracentrifugation and concentration → purity and contaminant testing

The source reports that this process has been used for isolation and characterization across over 300 plant species and can be adjusted for downstream requirements (reference price: 1,500 CNY/L; sample volume ≥3 L).

Step 3: Characterization

After isolation, multiple measures can be combined to assess EV morphology, particle size, concentration and marker proteins:

AssayMethod / platformReference priceTurnaroundDetails
Electron-microscopy morphologyTEM negative staining200 CNY/sample3 business daysSix images by default: four fields at 1,000, 500, 200 and 100 nm
Particle size and concentrationNano-flow cytometry (NanoFCM)200 CNY/sample3 business daysRecommended by default; single-particle analysis
Particle size and concentrationNTA(Zetaview)200 CNY/sample3 business daysNanoparticle tracking analysis
Particle size and concentrationNTA(NS300)400 CNY/sample5 business daysHigh-resolution option
Protein quantificationBCA assay50 CNY/sample1 business dayTotal protein concentration after lysis
Protein markersWestern Blot100 CNY/sample/marker3 business daysSix antibodies provided at no charge: CD9, CD63, CD81, TSG101, Syntenin1 and Calnexin
Protein markersNano-flow cytometry (NanoFCM)200 CNY/sample/marker3 business daysCD9, CD63 and CD81 flow antibodies provided at no charge
Plant EV marker note: the source notes that classical tetraspanins such as CD9, CD63 and CD81 may be less abundant in plant-derived than mammalian EVs. Confirm antibody suitability for the species, particularly outside human, rat and mouse, and consider plant-specific markers such as PEN1 or TET8 where appropriate.

Step 4: Quality control

For material and industrial applications, the source suggests considering these additional quality measures:

Quality measureMethodReference priceTurnaround
Purity assessmentLysis method (comparison before and after treatment with triton-100)500 CNY/sample3 business days
Purity assessmentMembrane dye method (Evmembrane Green Stains)500 CNY/sampleThree business days (animal-derived samples only)
Zeta potentialNTA(Zetaview)300 CNY/sample3 business days
OsmolalitySMC 30D osmometer200 CNY/sample3 business days
Microbial testing24-hour culture in medium with shaking200 CNY/sample3 business days
Mycoplasma testingqPCR200 CNY/sample3 business days
Endotoxin testingLimulus amebocyte lysate assay200 CNY/sample3 business days
Heavy-metal testingAtomic absorption spectroscopy (AAS)600 CNY/sampleFive business days (lead, cadmium, chromium, mercury and arsenic)

Frequently asked questions

Q1: How do isolation methods differ for plant and animal EVs?

A: The source identifies sample pretreatment as the main difference. It describes cellulase and pectinase digestion for plant cell walls (≤3 g tissue, 200 CNY/sample) and trypsin or collagenase for many animal samples, followed by shared isolation and purification steps.

Q2: What is the minimum sample amount?

A: The source estimates tens to hundreds of micrograms from 3 g of raw material in a small test and a few milligrams from 1 kg in batch extraction. Estimate input based on the EV amount needed downstream.

Q3: How long does isolation and characterization take?

A: The source lists approximately three business days for ultracentrifugation, particle sizing and TEM; about 20 business days with omics; and about ten business days for large-volume EXO-DM isolation (≥3 L).

Q4: Which plant species are supported?

A: Lifeint reports coverage of over 300 plant species, including more than 160 medicinal plants such as ginseng, astragalus, Panax notoginseng, aloe, Centella asiatica, tea, grape and loquat. Consult the species catalogue or contact the company.

Q5: Can the isolation process be customized?

A: The source says the EXO-DM large-volume workflow and quality controls can be adjusted for downstream needs, with customized plans quoted separately.

Why Lifeint?

For full service pricing, see Service pricing; for transcriptomics, proteomics or metabolomics, see Omics analysis guide; to request services, visit Isolation and characterization services.

Last updated: 2026-08-12

*Prepared by Xiamen Lifeint Technology. Reference prices and timelines follow Pricing ; specific terms are subject to the agreement between the parties.*

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About Lifeint

Lifeint provides EV research and application services from sample preparation, isolation and characterization to omics, functional studies, modification and scale-up. It jointly established a biomedical technology centre with Xiamen University School of Pharmaceutical Sciences, built process-development laboratories to GMP standards, and contributed to an EV expert consensus. Its service records cover more than 300 plant species.

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